PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv5_116890_qdme.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 187aa    MW: 21144.9 Da    PI: 7.0763
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv5_116890_qdme.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.58.4e-071265154
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54
                        +r  ++++ +  R+ri +  + L +++P+  +  +sk  +s a+  e+A++YI +L
  Bv5_116890_qdme.t1 12 KRLEKSIAQKSWRNRITELCSDLTSIIPPqHF--QSKNmVSQADQIEQATNYIVEL 65
                        57788999999******************775..88889**************777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.9941165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-71169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-71281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MKRKSDIPSS SKRLEKSIAQ KSWRNRITEL CSDLTSIIPP QHFQSKNMVS QADQIEQATN  60
YIVELRERVD NLNKSKEQLK LLVNQEETSI NQQNAILNDA TVANPRFPIV EVKDLGSSLA  120
VQLVIEQGYD IKLHEIIRVL EDEGAEVVNA TYSTSGNNII HTLHAKARSS RVGVEASRVY  180
ERLHDLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010678747.11e-135PREDICTED: uncharacterized protein LOC104894259
TrEMBLA0A0J8F4981e-135A0A0J8F498_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-18bHLH family protein